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ABOUT THIS RECORD
ID:
MNEST008171
species:
Homo sapiens
miRNA family:
mir-548
source:
miRNEST
Taxonomy by NCBI:
Homo sapiens
Homo
Homininae
Hominidae
Hominoidea
Catarrhini
Simiiformes
Haplorrhini
Primates
Euarchontoglires
Eutheria
Theria
Mammalia
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TAAAAACCGCAATTACTTTTG
miRNA*
AAAGCAATGGCAGTTTTTGCC
mismatches:
3
bulges:
0
View larger
pre-miRNA
ATTTAATATTAATTTAATATTAAATCGGTGTA
AAAGCAATGGCAGTTTTTGCC
ATTACATTT
TAAAAACCGCAATTACTTTTG
CACCAGCCTAATATTTG
TTGATGTTATTG
dot-bracket secondary structure
...((((((((((..(((((((....((((((
((((.(((.((.(((((((..
.........
))))))).)).))).))))))
))))....))))))).)
)))))))))...
SIMILARITIES
miRBase
hsa-mir-548q
:
0.0000000004
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-548: 0.0000000001
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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