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ABOUT THIS RECORD
ID:
MNEST008173
species:
Homo sapiens
miRNA family:
mir-548
source:
miRNEST
Taxonomy by NCBI:
Homo sapiens
Homo
Homininae
Hominidae
Hominoidea
Catarrhini
Simiiformes
Haplorrhini
Primates
Euarchontoglires
Eutheria
Theria
Mammalia
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AAAAGTAATTGCGGTTTTGCC
miRNA*
CCAAAAGCTACAGTTACTTTTGC
mismatches:
2
bulges:
2
View larger
pre-miRNA
GCAGAGGGATTATTGAATACTGGGTTTGAGC
AAAAGTAATTGCGGTTTTGCC
ATCATG
CCAAAAGCTACAGTTACTTTTGC
ACCAGCCTAATATTTACTA
AGTGCCAGA
dot-bracket secondary structure
......((.(((.((((((.((((((...((
(((((((((((.((((((((.
.....)
)..)))))).)))))))))))))
...)))))).)))))).))
)...))...
SIMILARITIES
miRBase
hsa-mir-548v
:
1e-37
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-548: 0.000002
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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