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ABOUT THIS RECORD

ID: MNEST008182
species: Homo sapiens
miRNA family: mir-548
source: miRNEST

Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AAAAGTAATTGCCGTTTTTGC

miRNA*
AGTAATGGCACATTACTTTTGC

mismatches: 3
bulges: 1

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pre-miRNA
ATAACTATTAGGTTGGTGCAAAAGTAATTGCCGTTTTTGCCATTAAAAGTAATGGCACATTACTTTTGCACCAACCGACCTAATA

dot-bracket secondary structure
..........(((((((((((((((((((((((((.((.........)).))))))).)))))))))))))))))).........


SIMILARITIES
miRBase hsa-mir-548i-1: 3e-19

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-548: 2e-17
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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