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ABOUT THIS RECORD

ID: MNEST008188
species: Homo sapiens
miRNA family: mir-548
source: miRNEST

Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GTTGGTGCAAAAGTAATTGCG

miRNA*
CAATTACTTTTGCAGCAACTA

mismatches: 2
bulges: 0

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pre-miRNA
TAGGTTGGTGCAAAAGTAATTGCGGTTTTTGTCATCACTTTCAATGGCAAAAGCCCCAATTACTTTTGCAGCAACTA

dot-bracket secondary structure
..(((((.((((((((((((((.((((((((((((........)))))))))))).)))))))))))))).))))).


SIMILARITIES
miRBase hsa-mir-548h-2: 7e-23

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-548: 1e-21
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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