ABOUT THIS RECORDspecies: Homo sapiens
miRNA family: mir-548
source: miRNEST
Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AAAAGTAATTGTGGTTTTTTG miRNA* AAAACCACAATTACTGTTGC mismatches: 2 bulges: 0 |
pre-miRNA
GACATGGCAGTGACTAATATTAGGTTGGTACAAAAGTAATTGTGGTTTTTTGCCATTGAAAGTAATGGTGAAAACCACAATTACTGTTGCAACAACCTAA
TATAAAGGATCAAATGCG
dot-bracket secondary structure
......(((.(((((.(((((((((((...(((.((((((((((((((((.(((((((....))))))))))))))))))))))).)))...))))))))
)))...)).)))..))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GACATGGCAGTGACTAATATTAGGTTGGTACAAAAGTAATTGTGGTTTTTTGCCATTGAAAGTAATGGTGAAAACCACAATTACTGTTGCAACAACCTAA
TATAAAGGATCAAATGCG
dot-bracket secondary structure
......(((.(((((.(((((((((((...(((.((((((((((((((((.(((((((....))))))))))))))))))))))).)))...))))))))
)))...)).)))..))).
SIMILARITIES| miRBase hsa-mir-548aa-2: 3e-20 PMRD no hits microPC no hits | UniProt no hits RFAM mir-548: 8e-18 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
