ABOUT THIS RECORDspecies: Homo sapiens
miRNA family: mir-544
source: miRNEST
Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATTCTGCATTTTTAACAAGCT miRNA* TTTCCAAAAGGGCAGCTTCT mismatches: 5 bulges: 1 |
pre-miRNA
GCCCGGACGAGATTCTGCATTTTTAACAAGCTGCCAGGTGATCCTGATGCTGCTAGTCCATGGATCACACTTTAGCTGAACAGCTACATATGACTGGGGA
TATAATACCCTGTGACAGCATCATACACAGTTTCCAAAAGGGCAGCTTCTCAAATATT
dot-bracket secondary structure
........((((..((((.(((((...((((((..(((((((((.(((.......)))...))))))).)).(((((....)))))..(((((..((((.
.......))))((....)).)))))..))))))..))))).))))..)))).......
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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GCCCGGACGAGATTCTGCATTTTTAACAAGCTGCCAGGTGATCCTGATGCTGCTAGTCCATGGATCACACTTTAGCTGAACAGCTACATATGACTGGGGA
TATAATACCCTGTGACAGCATCATACACAGTTTCCAAAAGGGCAGCTTCTCAAATATT
dot-bracket secondary structure
........((((..((((.(((((...((((((..(((((((((.(((.......)))...))))))).)).(((((....)))))..(((((..((((.
.......))))((....)).)))))..))))))..))))).))))..)))).......
SIMILARITIES| miRBase eca-mir-544b: 0.0001 PMRD no hits microPC no hits | UniProt no hits RFAM mir-544: 0.0000000006 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
