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ABOUT THIS RECORD
ID:
MNEST008219
species:
Homo sapiens
miRNA family:
mir-196
source:
miRNEST
Taxonomy by NCBI:
Homo sapiens
Homo
Homininae
Hominidae
Hominoidea
Catarrhini
Simiiformes
Haplorrhini
Primates
Euarchontoglires
Eutheria
Theria
Mammalia
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TAGGTAGTTTCCTGTTGTTGG
miRNA*
GACAGCACGACACTGCCTTCA
mismatches:
3
bulges:
0
View larger
pre-miRNA
GCACCTGAACTGGTCGGTGATT
TAGGTAGTTTCCTGTTGTTGG
GGATCCACCTTTCTCTC
GACAGCACGACACTGCCTTCA
TTACTTTCAGTTGANATCG
dot-bracket secondary structure
.......((((((..((((((.
.(((((((.((.(((((((((
((...........))))
))))))).)).)))))))..)
))))).)))))).......
SIMILARITIES
miRBase
oan-mir-196b
:
3e-35
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-196: 3e-29
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
download this record
deep sequencing data evidence