ABOUT THIS RECORDspecies: Homo sapiens
miRNA family: mir-196
source: miRNEST
Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TAAGTAGTTTCCTGTTGTTGG miRNA* GACAGCACGACACTGCCTTCA mismatches: 5 bulges: 0 |
pre-miRNA
CACCAGAACTGGTCGGTGATTTAAGTAGTTTCCTGTTGTTGGGATCCACCTTTCTCTCGACAGCACGACACTGCCTTCATTACTTCAGTTGAAATCG
dot-bracket secondary structure
......((((((..((((((....(((((.((.(((((((((((..........))))))))))).)).)))))....)))))))))))).......
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CACCAGAACTGGTCGGTGATTTAAGTAGTTTCCTGTTGTTGGGATCCACCTTTCTCTCGACAGCACGACACTGCCTTCATTACTTCAGTTGAAATCG
dot-bracket secondary structure
......((((((..((((((....(((((.((.(((((((((((..........))))))))))).)).)))))....)))))))))))).......
SIMILARITIES| miRBase mmu-mir-196b: 1e-40 PMRD no hits microPC no hits | UniProt no hits RFAM mir-196: 5e-37 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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