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ABOUT THIS RECORD
ID:
MNEST008237
species:
Homo sapiens
miRNA family:
mir-548
source:
miRNEST
Taxonomy by NCBI:
Homo sapiens
Homo
Homininae
Hominidae
Hominoidea
Catarrhini
Simiiformes
Haplorrhini
Primates
Euarchontoglires
Eutheria
Theria
Mammalia
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AAAAGTAATTGCGGTTTTTGC
miRNA*
ACGAGACAACTACTTTGAA
mismatches:
4
bulges:
2
View larger
pre-miRNA
TATCTTAAACCAGCTTTGAGGC
ACGAGACAACTACTTTGAA
AACCTTTATTATAGGTGAATGC
AAAAGTAATTGCGGTTTTTGC
ACTGTTGGAATTTGCC
ATT
dot-bracket secondary structure
.........(((((......((
(.(((.(((.((((((...
.((((.......))))......
.)))))).)))...))).)))
...)))))........
...
SIMILARITIES
miRBase
hsa-mir-548am
:
0.000001
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
U6: 0.00000002
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record