ABOUT THIS RECORDspecies: Homo sapiens
miRNA family: miR-221
source: miRNEST
Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ACCTGGCATACAATGTAGATT miRNA* GCTACATTGTCTGCTGGGTTTC mismatches: 4 bulges: 1 |
pre-miRNA
ACTTGCAAGCTGAACATCCAGGTCTGGGGCATGAACCTGGCATACAATGTAGATTTCTGTGTTCGTTAGGCAACAGCTACATTGTCTGCTGGGTTTCAGG
CTACCTGGAAACATGTTCTCCATTGGCT
dot-bracket secondary structure
....((.....((((((((((((....(((.(((((((((((.(((((((((....((((..((....))..))))))))))))).))))))).)))).)
)))))))))....))))).......)).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ACTTGCAAGCTGAACATCCAGGTCTGGGGCATGAACCTGGCATACAATGTAGATTTCTGTGTTCGTTAGGCAACAGCTACATTGTCTGCTGGGTTTCAGG
CTACCTGGAAACATGTTCTCCATTGGCT
dot-bracket secondary structure
....((.....((((((((((((....(((.(((((((((((.(((((((((....((((..((....))..))))))))))))).))))))).)))).)
)))))))))....))))).......)).
SIMILARITIES| miRBase mml-mir-221: 8e-58 PMRD no hits microPC no hits | UniProt no hits RFAM mir-221: 9e-27 | most similar mature miRNAs |
Identical with: ppy-mir-221 from miRBase (MNEST030916) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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