ABOUT THIS RECORDspecies: Homo sapiens
miRNA family: miR-133a
source: miRNEST
Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GCTGGTAAAATGGAACCAAAT miRNA* TTGGTCCCCTTCAACCAGCTG mismatches: 4 bulges: 0 |
pre-miRNA
GCTTTGCTAGAGCTGGTAAAATGGAACCAAATCGCCTCTTCAATGGATTTGGTCCCCTTCAACCAGCTGTAGCTATG
dot-bracket secondary structure
.....((((.(((((((..((.((.((((((((............)))))))).)).))..))))))).))))....
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GCTTTGCTAGAGCTGGTAAAATGGAACCAAATCGCCTCTTCAATGGATTTGGTCCCCTTCAACCAGCTGTAGCTATG
dot-bracket secondary structure
.....((((.(((((((..((.((.((((((((............)))))))).)).))..))))))).))))....
SIMILARITIES| miRBase cfa-mir-133a: 2e-38 PMRD no hits microPC no hits | UniProt no hits RFAM mir-133: 2e-23 | most similar mature miRNAs |
Identical with: sla-mir-133a from miRBase (MNEST027618) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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