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ABOUT THIS RECORD

ID: MNEST008292
species: Homo sapiens
miRNA family: mir-558
source: miRNEST

Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGAGCTGCTGTACCAAAAT

miRNA*
TTTGGTAAAGTAGCTCTAG

mismatches: 2
bulges: 0

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pre-miRNA
GTGTGTGTGGTTATTTTGGTAAAGTAGCTCTAGACTCTATTATAGTTTCCTGAGCTGCTGTACCAAAATACCACAAACGG

dot-bracket secondary structure
.(((.((((((.(((((((((.((((((((.(((((.......)))))...)))))))).))))))))))))))).))).


SIMILARITIES
miRBase hsa-mir-558: 9e-38

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-558: 3e-28
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
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