ABOUT THIS RECORDspecies: Vitis vinifera
miRNA family: MIRf1281
source: miRNEST
Taxonomy by NCBI:
Vitis vinifera Vitis Vitaceae Vitales rosids incertae sedis rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGTGTTTGGTTGCTAAGAAAA miRNA* TTCTCAGCAACCAAACAGAGT mismatches: 2 bulges: 0 |
pre-miRNA
GTTGCTAAGCCTGTGTTTGGTTGCTAAGAAAAACTTAAGAAACAAGGGGTTTCGGATTTTGCTCTCTCTGACAGTAAAGTTGAAGATTTAAAACTTTTTA
GTTTGTTTTCTTTTTCCTACCTTTTCTCAGCAACCAAACAGAGTACTATTGT
dot-bracket secondary structure
..........((.((((((((((((.((((((...((.(((((.....))))).(((((((((.((...)).)))))))))(((((....(((((....)
))))....)))))....))..)))))).)))))))))))).)).........
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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GTTGCTAAGCCTGTGTTTGGTTGCTAAGAAAAACTTAAGAAACAAGGGGTTTCGGATTTTGCTCTCTCTGACAGTAAAGTTGAAGATTTAAAACTTTTTA
GTTTGTTTTCTTTTTCCTACCTTTTCTCAGCAACCAAACAGAGTACTATTGT
dot-bracket secondary structure
..........((.((((((((((((.((((((...((.(((((.....))))).(((((((((.((...)).)))))))))(((((....(((((....)
))))....)))))....))..)))))).)))))))))))).)).........
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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