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ABOUT THIS RECORD

ID: MNEST008312
species: Vitis vinifera
miRNA family: MIR168
source: miRNEST

Taxonomy by NCBI:
Vitis vinifera Vitis Vitaceae Vitales rosids incertae sedis rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCGCTTGGTGCAGGTCGGGAA

miRNA*
 CCCGCCTTGCATCAACTGAAT

mismatches: 3
bulges: 0
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pre-miRNA
 ACGGTGGTCTCTAATTCGCTTGGTGCAGGTCGGGAACCGACTTCGCCGCTCCGGCAGCGCCGGAGGCACGCGGCGGCCTACGATTGGTTGCTGAGCGAAT
TCCGATCCCGCCTTGCATCAACTGAATCGGAGACGGCGG

dot-bracket secondary structure
...((.((((((.(((((.((((((((((.(((((...((.(((((.((((((((...)))))).))...((((((((.......)))))))).))))).
))...))))).)))))))))).))))).)))))).))..


SIMILARITIES
miRBase vvi-MIR168: 6e-71

PMRD vvi-miR168: 6e-71

microPC miR168: 8e-58		UniProt no hits

RFAM MIR168: 7e-74		most similar mature miRNAs

Identical with: vvi-MIR168 from miRBase (MNEST041596)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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deep sequencing data evidence




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