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ABOUT THIS RECORD
ID:
MNEST008358
species:
Medicago truncatula
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Medicago truncatula
Medicago
Trifolieae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATACTCCCTCCGTCCCNAATT
miRNA*
TTTGGGACAGAGGGAGTATGT
mismatches:
2
bulges:
0
View larger
pre-miRNA
CNCGCAGATCA
ATACTCCCTCCGTCCCNAATT
GTACGAGGTTTTGGGCTTTTCACACATATTAAGAAATGTAATTAATATTGTGTGAGAAACAAATATTA
TGAGTTGCTTTACAAAATTATCCTTAATAAATGATACGAGAAAGATAAATGAAAGAATTGAAAGAAGAAAAAGTAAAATAGTTAAGGATATAGTAGGAAA
AGTAACATTAATGTTTCATTGGTATTGTAAAGTGAAATACAATTTGGGACAAATATTTTTTCTAAAATGACATACAA
TTTGGGACAGAGGGAGTATGT
TA
ATTCAG
dot-bracket secondary structure
......((...
((((((((((.(((((.((((
(((....((((((((.((((((((((((((((.........)))))).))))))))))..(((((((.
(((((((((((.......((((((((((..((..(((..........(((......))).............)))..)).))))))))))........))
)))))).))).(((((((...(((((.........)))))....))))))))))))))..))))))))....)))))
)).))))).))))))))))..
..
..))..
SIMILARITIES
miRBase
no hits
PMRD
osa-miRf11090-akr
:
0.0002
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
Source sequences
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