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ABOUT THIS RECORD

ID: MNEST008397
species: Medicago truncatula
miRNA family: MIR398
source: miRNEST

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGTGTTCTCAGGTCGCCCCTG

miRNA*
 GGGTCGACATGAGAGCACATG

mismatches: 2
bulges: 0
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pre-miRNA
 ATTGAGGTTTTGATGTTCTACAGGGTCGACATGAGAGCACATGAAGCTATCATGGTTGTCTATGTTATCCAACTCATGTGTTCTCAGGTCGCCCCTGCTG
AATTTTCTCTGCTAAA

dot-bracket secondary structure
.....(((...((.((((..(((((.((((.(((((((((((((......(((((....))))).........))))))))))))).)))).)))))..)
)))..))...)))...


SIMILARITIES
miRBase mtr-MIR398b: 5e-37

PMRD mtr-miR398a: 3e-38

microPC miR398: 3e-38		UniProt no hits

RFAM MIR398: 4e-41		most similar mature miRNAs

Identical with: miR398 from microPC (MNEST046371)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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