ABOUT THIS RECORDspecies: Acyrthosiphon pisum
miRNA family: miR-iab
source: miRNEST
Taxonomy by NCBI:
Acyrthosiphon pisum Acyrthosiphon Macrosiphini Aphidinae Aphididae Aphidoidea Aphidomorpha Aphidiformes Sternorrhyncha Hemiptera Paraneoptera Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CGGTATACCTTCAGTATACGTAAC miRNA* ACGTATACTAAATGTATCCTGAG mismatches: 3 bulges: 1 |
pre-miRNA
ATAATGCGTGGCACCCTGTACGTATACTAAATGTATCCTGAGTGCATTATAAAACTGTCCGGTATACCTTCAGTATACGTAACAGGGTGCCATACCGA
dot-bracket secondary structure
)......(((((((((((((((((((((.((.((((.((((((..........)))...))).)))).)).))))))))).)))))))))))).....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ATAATGCGTGGCACCCTGTACGTATACTAAATGTATCCTGAGTGCATTATAAAACTGTCCGGTATACCTTCAGTATACGTAACAGGGTGCCATACCGA
dot-bracket secondary structure
)......(((((((((((((((((((((.((.((((.((((((..........)))...))).)))).)).))))))))).)))))))))))).....
SIMILARITIES| miRBase api-mir-iab-4: 7.0E-36 PMRD no hits microPC no hits | UniProt no hits RFAM 4mir-iab-4: 9.0E-45 | most similar mature miRNAs |
Identical with: api-mir-iab-4 from miRBase (MNEST035162) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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