miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST008457
species: Sorghum bicolor
miRNA family: MIR528
source: miRNEST

Taxonomy by NCBI:
Sorghum bicolor Sorghum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGGAAGGGGCATGCAGAGGAG

miRNA*
CTCCTGTGCCTGCCTCTTCCATT

mismatches: 1
bulges: 2

View larger
pre-miRNA
AGCAGCAGCAGTGGAAGGGGCATGCAGAGGAGCACGAGGCTTGGCTGGAAGCCGACCTACGCCTCGCTGGCTCTCCTGTGCCTGCCTCTTCCATTCCTTC
TGC


dot-bracket secondary structure
.((((.((.((((((((((((((((((.(((((.((((((((((((...)))))).....))))))...))))).)))))..))))))))))))).)).)
)))



SIMILARITIES
miRBase sbi-MIR528: 2e-42

PMRD osa-miR528: 0.0000003

microPC miR528: 7e-39
UniProt no hits

RFAM no hits
most similar mature miRNAs

Identical with: sbi-MIR528 from miRBase (MNEST042623)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;