ABOUT THIS RECORDspecies: Sorghum bicolor
miRNA family: MIR2914
source: miRNEST
Taxonomy by NCBI:
Sorghum bicolor Sorghum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CATGGTGGTGACGGGTGACGG miRNA* GTAACCTCTCGCTTCCGCAAT mismatches: 5 bulges: 0 |
pre-miRNA
CTAGGGGCCTACCATGGTGGTGACGGGTGACGGAATCGTGCATTACTCTAACTATCATGATGGTACGATCCCGTAACCTCTCGCTTCCGCAATTCTAGCCC
dot-bracket secondary structure
)...((((......(((.(((((.((((.((((.(((((((.....................))))))).)))).)))).))))).)))........))))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CTAGGGGCCTACCATGGTGGTGACGGGTGACGGAATCGTGCATTACTCTAACTATCATGATGGTACGATCCCGTAACCTCTCGCTTCCGCAATTCTAGCCC
dot-bracket secondary structure
)...((((......(((.(((((.((((.((((.(((((((.....................))))))).)))).)))).))))).)))........))))
SIMILARITIES| miRBase no hits PMRD peu-miR2914: 1.0E-9 microPC no hits | UniProt no hits RFAM aSSU_rRNA_eukarya: 9.0E-11 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
