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ABOUT THIS RECORD

ID: MNEST008468
species: Sorghum bicolor
miRNA family: MIRf10
source: miRNEST

Taxonomy by NCBI:
Sorghum bicolor Sorghum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GATCAAAAGATTCGTCTCGCG

miRNA*
 CGAGACGAAACTTTTGAGCCT

mismatches: 3
bulges: 0
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pre-miRNA
 AATTTACGAGACGAAACTTTTGAGCCTAGTTAGTTCATGATTGGACAATATTTGTCAAATACAAACGAGATTGGGACTATTCACATTTTGCAAAAAAATT
TTGGAACTAAACAAGGCCTTTTTCCATCGAGTTTCCGTTTCTTGACGCCCGACTTCACTCTGTCCATGACTCTGTGTGCCAGGACACTTCCTGTTTTAGG
CCTTGTTTAGTTCCGAAAAGATTTCGGATTTCGGTACTGTAGCATTTTCGTTTGTTTGTGACAAATATTATCCAATTATGGACTAACTAGGATCAAAAGA
TTCGTCTCGCGATT

dot-bracket secondary structure
...((.(((((((((.(((((((.(((((((((((((((((((((.(((((((((((...((((((((((.((..((...((...((((....)))).((
(((((((((((((((((((.....((..((((.(((..........((.......(((...(((...)))...))).))..))).))))..))....)))
)))))))))))))))))).((((...))))..))....))..)).))))))))))...))))))))))).))))))))))))))))))))).))))))).
))))))))).))..


SIMILARITIES
miRBase osa-MIR2124a: 0.00002

PMRD osa-miRf11301-akr: 0.0000003

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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