ABOUT THIS RECORDspecies: Saccoglossus kowalevskii
miRNA family: miR-2482
source: miRNEST
Taxonomy by NCBI:
Saccoglossus kowalevskii Saccoglossus Harrimaniidae Enteropneusta Hemichordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GTATTTTTCTTTGTCGTTATT miRNA* TTAATTACATCAAGAATAGTATCG mismatches: 3 bulges: 2 |
pre-miRNA
GATGATTGATTTGTATTTGTCGAGAAAACGCTTAATTACATCAAGAATAGTATCGTGTTCGTCAAATTCCAATATGTATCTTTTTAGTTCTTTGCCCTTT
CCTATTTTCATGTGAAACGTTAATGTATTTTTCTTTGTCGTTATTGTTCTTTTCAGGTCCAAGTCCACTTTAAA
dot-bracket secondary structure
.......((((((.(((((..((((..(((..((((.(((..(((((.(((((..((..(((....(((..(((((........(((.............
.)))....))))))))))).))..))))).)))))))).)))).)))))))..))))).)))))).........
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
GATGATTGATTTGTATTTGTCGAGAAAACGCTTAATTACATCAAGAATAGTATCGTGTTCGTCAAATTCCAATATGTATCTTTTTAGTTCTTTGCCCTTT
CCTATTTTCATGTGAAACGTTAATGTATTTTTCTTTGTCGTTATTGTTCTTTTCAGGTCCAAGTCCACTTTAAA
dot-bracket secondary structure
.......((((((.(((((..((((..(((..((((.(((..(((((.(((((..((..(((....(((..(((((........(((.............
.)))....))))))))))).))..))))).)))))))).)))).)))))))..))))).)))))).........
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
