ABOUT THIS RECORDspecies: Nematostella vectensis
miRNA family: miR-2049
source: miRNEST
Taxonomy by NCBI:
Nematostella vectensis Nematostella Edwardsiidae Actiniaria Hexacorallia Anthozoa Cnidaria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CAAATGCACGCAAATGAAGAA miRNA* ATTCATTTGCATGCATTTGCA mismatches: 4 bulges: 0 |
pre-miRNA
TTGTCTAATGCTAAGTTCAAACGTCGTACTATCCATGAGCCGCACTCAATGCAAATGCACGCAAATGAAGAAGAAACAATCGACTCGATTCATTTGCATG
CATTTGCATTGAACACGGCTAATGGACAATACGACGTTTGAACTAAGCCTAACTTG
dot-bracket secondary structure
.........(((.(((((((((((((((...(((((.(((((...((((((((((((((.(((((((((...((..........))..))))))))).))
))))))))))))...))))).)))))...))))))))))))))).)))........
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TTGTCTAATGCTAAGTTCAAACGTCGTACTATCCATGAGCCGCACTCAATGCAAATGCACGCAAATGAAGAAGAAACAATCGACTCGATTCATTTGCATG
CATTTGCATTGAACACGGCTAATGGACAATACGACGTTTGAACTAAGCCTAACTTG
dot-bracket secondary structure
.........(((.(((((((((((((((...(((((.(((((...((((((((((((((.(((((((((...((..........))..))))))))).))
))))))))))))...))))).)))))...))))))))))))))).)))........
SIMILARITIES| miRBase nve-mir-2049: 3e-30 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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