miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST008574
species: Dendroctonus ponderosae
miRNA family: mir-99
source: miRNEST

Taxonomy by NCBI:
Dendroctonus ponderosae Dendroctonus Scolytinae Curculionidae Curculionoidea Cucujiformia Polyphaga Coleoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AACCCGTAGAACCGAACTTGT

miRNA*
GGGTTCGCTTTTAAGGGTACC

mismatches: 3
bulges: 0

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pre-miRNA
CGGACAATTTTTGCGAGAAGGAACCCGTAGAACCGAACTTGTGTTTGTTTTTGTCACGGGTTCGCTTTTAAGGGTACCTTCTTTCGAAAAATTAGC

dot-bracket secondary structure
.......((((((.(((((((.((((.(((((.((((((((((..(......).)))))))))).))))).)))).))))))).))))))......


SIMILARITIES
miRBase cte-mir-100: 0.000005

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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