ABOUT THIS RECORDspecies: Dendroctonus ponderosae
miRNA family: mir-455
source: miRNEST
Taxonomy by NCBI:
Dendroctonus ponderosae Dendroctonus Scolytinae Curculionidae Curculionoidea Cucujiformia Polyphaga Coleoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TATGTGCCTTTGGACAAGATA miRNA* TTTGTGCTGATGGTTCATACT mismatches: 5 bulges: 0 |
pre-miRNA
TACCTCCTTGCATATGTGCCTTTGGACAAGATAACAATTCTATTATTGTTGTTTGTGCTGATGGTTCATACTACAAATTT
dot-bracket secondary structure
)...........((((.(((.((((...((((((((((......))))))))))...)))).))).))))..........
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TACCTCCTTGCATATGTGCCTTTGGACAAGATAACAATTCTATTATTGTTGTTTGTGCTGATGGTTCATACTACAAATTT
dot-bracket secondary structure
)...........((((.(((.((((...((((((((((......))))))))))...)))).))).))))..........
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|Q68F45|WIPI3_XENLA: 4.0E-6 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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