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ABOUT THIS RECORD

ID: MNEST008589
species: Daphnia pulex
miRNA family: miR-2359
source: miRNEST

Taxonomy by NCBI:
Daphnia pulex Daphnia Daphniidae Anomopoda Cladocera Diplostraca Phyllopoda Branchiopoda Crustacea Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GATTGTTTTGTTTTCTTTTCT

miRNA*
AGGTGTGAAATAATAGTAGTTGC

mismatches: 4
bulges: 2

View larger
pre-miRNA
TTGGAGAGGTGTGAAATAATAGTAGTTGCAGGACGTTGCGAAATGCGGGTGGAAGGAAATTTCGGAAAATATCCGTCGACCGCTCCGTCGAACGTCCAGA
TTGTTTTGTTTTCTTTTCT
TCA


dot-bracket secondary structure
.((((((((...(((((((...(((((...(((((((.(((...((((.(((..(((.((((....)))).))).))).))))....)))))))))).))
)))..)))))))..)))))
)))



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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