miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST008600
species:
Nasonia vitripennis
miRNA family:
let-7
source:
miRNEST
Taxonomy by NCBI:
Nasonia vitripennis
Nasonia
Pteromalinae
Pteromalidae
Chalcidoidea
Chaldicoidea group
Apocrita
Hymenoptera
Endopterygota
Neoptera
Pterygota
Dicondylia
Insecta
Hexapoda
Pancrustacea
Mandibulata
Arthropoda
Panarthropoda
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGAGGTAGTAGGTTGTATAGT
miRNA*
TGTACAACTTGCTAACTTTCC
mismatches:
2
bulges:
0
View larger
pre-miRNA
AAAATAGCGGCGACGCCTGGG
TGAGGTAGTAGGTTGTATAGT
GGGGAATGAAAATTCGTCATTATGGAATCCAC
TGTACAACTTGCTAACTTTCC
CGGTT
GTCGGCGCCTCGG
dot-bracket secondary structure
......(((.(((((.(((((
.(((.((((((((((((((((
(((.(((((.......)))))......)))))
)))))))))))))).))).))
))).)
)))).))).....
SIMILARITIES
miRBase
nvi-let-7
:
2e-51
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
let-7: 2e-40
most similar mature miRNAs
Identical with:
nvi-let-7
from miRBase (
MNEST037629
)
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record