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ABOUT THIS RECORD

ID: MNEST008605
species: Strongylocentrotus purpuratus
miRNA family: mir-14
source: miRNEST

Taxonomy by NCBI:
Strongylocentrotus purpuratus Strongylocentrotus Strongylocentrotidae Echinoida Echinacea Euechinoidea Echinoidea Echinozoa Eleutherozoa Echinodermata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCTGTTTTTTTCTCTCTCCTA

miRNA*
 GTCGAGAAAAAAAAAGTAT

mismatches: 4
bulges: 2
View larger
pre-miRNA
 CTATTTTATACGATGCATATTTAATGGTTCTGGTCGAGAAAAAAAAAGTATGAATGAAAAATACATTTGTGATTTGATTACTTTAGTCACAATCATTTCA
TTTCATTCATTTTTTTTTAAAGAAAAGGTGGAGTTACAAATAAACAAGTAAATACTACACCAATTCTGTTTTTTTCTCTCTCCTAGAATCATTTAAAAAT
GCAAATTTTAGAAA

dot-bracket secondary structure
...(((((.....(((((.((((((((((((((..((((((((((.((.((((((((((.......((((((((.((....)).))))))))........
)))))))).((((((....)))))).((((.((((((..........)))...))).)))).)).)).))))))))))....))))))))).))))).))
))).....))))).


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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