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ABOUT THIS RECORD
ID:
MNEST008623
species:
Strongylocentrotus purpuratus
miRNA family:
miR-315b
source:
miRNEST
Taxonomy by NCBI:
Strongylocentrotus purpuratus
Strongylocentrotus
Strongylocentrotidae
Echinoida
Echinacea
Euechinoidea
Echinoidea
Echinozoa
Eleutherozoa
Echinodermata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGTTGATTGTTGTACACAAAA
miRNA*
ATGTGTTTTAATTGTGACATA
mismatches:
4
bulges:
2
View larger
pre-miRNA
CAAGTGCTGTACAAATGAATACTGAAATGTACCTATAGCTTT
ATGTGTTTTAATTGTGACATA
CATTTTTGTAAAAT
TGTTGATTGTTGTACACAAAA
AA
TTATGTGCATTTATAATTATTTTTGCGAAAACATTAT
dot-bracket secondary structure
...((..((((.((((((.((...((((((((..((((.(((
.(((((..((((..(((((((
((....))))....
)))))...)))).))))).))
).
)))))))))))).)).)))))).))))...)).....
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record