ABOUT THIS RECORDspecies: Strongylocentrotus purpuratus
miRNA family: miR-4206
source: miRNEST
Taxonomy by NCBI:
Strongylocentrotus purpuratus Strongylocentrotus Strongylocentrotidae Echinoida Echinacea Euechinoidea Echinoidea Echinozoa Eleutherozoa Echinodermata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATTGAATGGTTTAGTGAGATC miRNA* TCAAACTTGATCATTTAGAGG mismatches: 4 bulges: 0 |
pre-miRNA
CGCTACTACCGATTGAATGGTTTAGTGAGATCCTCGGATCCTCGGCGTCGGGACGGCTTTGCCGCCTCGCTCGCATGTACGAGAAGACGATCAAACTTGA
TCATTTAGAGGAAGTAAAA
dot-bracket secondary structure
...((((.((..((((((((((.(((..((((.((...((..(((((.((((.((((...)))).))))..))).))...))...)).))))..))).))
)))))))).)).))))...
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
CGCTACTACCGATTGAATGGTTTAGTGAGATCCTCGGATCCTCGGCGTCGGGACGGCTTTGCCGCCTCGCTCGCATGTACGAGAAGACGATCAAACTTGA
TCATTTAGAGGAAGTAAAA
dot-bracket secondary structure
...((((.((..((((((((((.(((..((((.((...((..(((((.((((.((((...)))).))))..))).))...))...)).))))..))).))
)))))))).)).))))...
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM SSU_rRNA_eukarya: 2e-46 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
