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ABOUT THIS RECORD

ID: MNEST008638
species: Strongylocentrotus purpuratus
miRNA family: miR-2500
source: miRNEST

Taxonomy by NCBI:
Strongylocentrotus purpuratus Strongylocentrotus Strongylocentrotidae Echinoida Echinacea Euechinoidea Echinoidea Echinozoa Eleutherozoa Echinodermata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GGATTTTGTGTTTGGACCACT

miRNA*
TGATTCACATGCATCATCCCA

mismatches: 4
bulges: 0

View larger
pre-miRNA
AACATAGGGCGGTGATTCACATGCATCATCCCAGGTTACTGCTAGGGGAAGTGGAAATTCCCATGCAGCATGGGGATAACCCCAGGCGGATGGGTGTAGC
AAGGGTGTATGCCCGCAAGAGGGTAATCCTTCCTCCCAATGCCGTTAAGAGGGTGACTGGGGTTATCGACCAACGGATAGGGGATTTTGTGTTTGGACCA
CT
GCTAAACCC


dot-bracket secondary structure
.......(((((((.((((.(((((..(((((..(((.((((...(((((.......)))))..))))..(((.(((((((((.((((..((((...((.
((((((...(((((......))))))))))).)))))).))))((((......)))).)))))))))..)))...)))..)))))..))))).)))).))
))
)))......



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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