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ABOUT THIS RECORD

ID: MNEST008643
species: Strongylocentrotus purpuratus
miRNA family: miR-4006a
source: miRNEST

Taxonomy by NCBI:
Strongylocentrotus purpuratus Strongylocentrotus Strongylocentrotidae Echinoida Echinacea Euechinoidea Echinoidea Echinozoa Eleutherozoa Echinodermata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ATCATTACTTCAATGTTTCAA

miRNA*
GCAATAATGAAATAAGTTAG

mismatches: 5
bulges: 1

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pre-miRNA
TAATTATATTTATCATTACTTCAATGTTTCAAGCATTGATTTTGATAACCTGTCTATCGAAGTTCATCTTTGCAATAATGAAATAAGTTAGTTTTAAAA

dot-bracket secondary structure
...(((...(((...(((.((((.((((.((((.((.((((((((((.......)))))))))).)).)))).)))).)))).)))..)))...)))..


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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