ABOUT THIS RECORDspecies: Strongylocentrotus purpuratus
miRNA family: miR-4006a
source: miRNEST
Taxonomy by NCBI:
Strongylocentrotus purpuratus Strongylocentrotus Strongylocentrotidae Echinoida Echinacea Euechinoidea Echinoidea Echinozoa Eleutherozoa Echinodermata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATCATTACTTCAATGTTTCAA miRNA* GCAATAATGAAATAAGTTAG mismatches: 5 bulges: 1 |
pre-miRNA
TAATTATATTTATCATTACTTCAATGTTTCAAGCATTGATTTTGATAACCTGTCTATCGAAGTTCATCTTTGCAATAATGAAATAAGTTAGTTTTAAAA
dot-bracket secondary structure
...(((...(((...(((.((((.((((.((((.((.((((((((((.......)))))))))).)).)))).)))).)))).)))..)))...)))..
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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TAATTATATTTATCATTACTTCAATGTTTCAAGCATTGATTTTGATAACCTGTCTATCGAAGTTCATCTTTGCAATAATGAAATAAGTTAGTTTTAAAA
dot-bracket secondary structure
...(((...(((...(((.((((.((((.((((.((.((((((((((.......)))))))))).)).)))).)))).)))).)))..)))...)))..
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
