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ABOUT THIS RECORD
ID:
MNEST008648
species:
Brassica oleracea
miRNA family:
miR3623
source:
miRNEST
Taxonomy by NCBI:
Brassica oleracea
Brassica
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGGTGCTTGGACGAATTTGCC
miRNA*
AGAGTGTTTGGGTTTCATG
mismatches:
2
bulges:
2
View larger
pre-miRNA
TTTTGTTTGAGG
AGAGTGTTTGGGTTTCATG
ATGATGGTGAGCCTGTTGTGAGGGCTTATGTCTGTGAGAATGGGCATGTCTC
TGGTGCTTGGACGAATT
TGCC
TCTCTACAC
dot-bracket secondary structure
...(((..((((
(((.(((((((((.(((.(
(.(((.((((((((.......))))))))((((((....))))))..)))))
))).)))))))))..))
).))
))...))).
SIMILARITIES
miRBase
vvi-MIR3623
:
0.0003
PMRD
no hits
microPC
no hits
UniProt
sp|Q8LEA8|EID1_ARATH: 4e-16
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
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