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ABOUT THIS RECORD

ID: MNEST008648
species: Brassica oleracea
miRNA family: miR3623
source: miRNEST

Taxonomy by NCBI:
Brassica oleracea Brassica Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGGTGCTTGGACGAATTTGCC

miRNA*
AGAGTGTTTGGGTTTCATG

mismatches: 2
bulges: 2

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pre-miRNA
TTTTGTTTGAGGAGAGTGTTTGGGTTTCATGATGATGGTGAGCCTGTTGTGAGGGCTTATGTCTGTGAGAATGGGCATGTCTCTGGTGCTTGGACGAATT
TGCC
TCTCTACAC


dot-bracket secondary structure
...(((..(((((((.(((((((((.(((.((.(((.((((((((.......))))))))((((((....))))))..)))))))).)))))))))..))
).))
))...))).



SIMILARITIES
miRBase vvi-MIR3623: 0.0003

PMRD no hits

microPC no hits
UniProt sp|Q8LEA8|EID1_ARATH: 4e-16

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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