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ABOUT THIS RECORD
ID:
MNEST008654
species:
Brassica oleracea
miRNA family:
MIRf118
source:
miRNEST
Taxonomy by NCBI:
Brassica oleracea
Brassica
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CGGACCCGGATACGGATCCGA
miRNA*
GGGCTGGGATCCGGGTATGGG
mismatches:
2
bulges:
2
View larger
pre-miRNA
GACCAAACACC
CGGACCCGGATACGGATCCGA
TCCGGATGCTGTACGGGTTACCGATCGGAGACCAAGACGTGAAAGGTATGGAGATGGGTGGTGGTGGG
AGTTTTAGCTCGCTTTTGGCGTCGAATATGCAGTTGGGTCTTGGTGGGATCATCCTAGACGGGTC
GGGCTGGGATCCGGGTATGGG
ACTAAAGA
dot-bracket secondary structure
.........((
((.((((((((.(((.(((((
((((....(((..(((....)))..)))..((((((((.(((...(((((..((((..(((.((((((
........)))))).))).))))...)))))..))).))))))))((((...))))...))))))
))))))..)))))))).))))
........
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
sp|Q94AR6|DOF31_ARATH: 0.00000000008
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record