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ABOUT THIS RECORD
ID:
MNEST008721
species:
Oreochromis niloticus
miRNA family:
miR-2304
source:
miRNEST
Taxonomy by NCBI:
Oreochromis niloticus
Oreochromis
Tilapiini
Pseudocrenilabrinae
African cichlids
Cichlidae
Labroidei
Perciformes
Percomorpha
Euacanthopterygii
Acanthopterygii
Holacanthopterygii
Euacanthomorpha
Acanthomorpha
Ctenosquamata
Eurypterygii
Neoteleostei
Neognathi
Euteleostei
Clupeocephala
Elopocephala
Teleostei
Neopterygii
Actinopteri
Actinopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GATTGTGTGTTTGTGTGTGTC
miRNA*
TAAACACAGATCGCTTGGGA
mismatches:
5
bulges:
1
View larger
pre-miRNA
AAGAATATTAGGTCAGCCAGA
TAAACACAGATCGCTTGGGA
GGAACCACAGATGGATGAGTCGTGTGTCTAT
GATTGTGTGTTTGTGTGTGTC
ATCCATG
AACATGTGTGGACATGAAAGAGGTTTGTAAGC
dot-bracket secondary structure
..((........)).....((
((.(((((((((((......
(((..(((.(((......))))))..)))..
....))).)))))))).))))
.((((((
......)))))).(((((.....)))))....
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record