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ABOUT THIS RECORD

ID: MNEST008734
species: Oreochromis niloticus
miRNA family: mir-297
source: miRNEST

Taxonomy by NCBI:
Oreochromis niloticus Oreochromis Tilapiini Pseudocrenilabrinae African cichlids Cichlidae Labroidei Perciformes Percomorpha Euacanthopterygii Acanthopterygii Holacanthopterygii Euacanthomorpha Acanthomorpha Ctenosquamata Eurypterygii Neoteleostei Neognathi Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ATGTGTGTGTGAATGTGTGTG

miRNA*
ATACAAATACAGGCCATTT

mismatches: 3
bulges: 2

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pre-miRNA
GTTTCTTTATGTTGTGTGTAAATGTGTGTGTGAATGTGTGTGTGAATGGGTGGATGACTGAGTAGAGTGTAAAGCGCTTTGGGGTCCTTAGGACCAAGTA
AAGCGCTATACAAATACATTATAATACAAATACAGGCCATTTACCATTTACCATTTGTTT


dot-bracket secondary structure
.............(((.(((((((.(((.(((..(((((.((((.((((((.....)))..(((...((((.(((((((((.(((((...)))))...))
))))))).))))..)))..)))..)))).)))))...))).)))))))))))))......



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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