miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST008737
species: Oreochromis niloticus
miRNA family: miR-1603
source: miRNEST

Taxonomy by NCBI:
Oreochromis niloticus Oreochromis Tilapiini Pseudocrenilabrinae African cichlids Cichlidae Labroidei Perciformes Percomorpha Euacanthopterygii Acanthopterygii Holacanthopterygii Euacanthomorpha Acanthomorpha Ctenosquamata Eurypterygii Neoteleostei Neognathi Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GTGGTTTGTTTTTTGTTTTTT

miRNA*
AAGACAAAATAAAACCACTC

mismatches: 3
bulges: 1

View larger
pre-miRNA
CATTAGCAGTTAAAGACAAAATAAAACCACTCAAATGCAGTCAGGCCTTTGTACCCAGGTAAGGAACCTGCCCAGATTTAAATGTGGTTTGTTTTTTGTT
TTTT
TTGTTTTTT


dot-bracket secondary structure
.....((((..((((((((((..(((((((..((((((((((..((((........))))...))..))))....))))....)))))))...)))))))
))).
)))).....



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record





Liczniki na strone;