ABOUT THIS RECORDspecies: Molgula tectiformis
miRNA family: mir-191
source: miRNEST
Taxonomy by NCBI:
Molgula tectiformis Molgula Molgulidae Stolidobranchia Ascidiacea Tunicata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GAATCAAATCCAAGTGCAGCT miRNA* CATGTTCTTGTATTAATTCAA mismatches: 5 bulges: 1 |
pre-miRNA
TTACCAAGTAAGAATCAAATCCAAGTGCAGCTGTTATAACTAGCTTGGATTCTGCACATGCTACAACAGAAGGCATCCATCTGCTTTCCCGTGAATCTGT
TAGTAAAAATATAACATCATGTTCTTGTATTAATTCAATAATTTTT
dot-bracket secondary structure
...........((((..(((.((((.(((..(((((((((((((..((((((.((....))....((.(((((((......)))))))..))))))))))
)))).....)))))))...))).)))).))).))))..........
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TTACCAAGTAAGAATCAAATCCAAGTGCAGCTGTTATAACTAGCTTGGATTCTGCACATGCTACAACAGAAGGCATCCATCTGCTTTCCCGTGAATCTGT
TAGTAAAAATATAACATCATGTTCTTGTATTAATTCAATAATTTTT
dot-bracket secondary structure
...........((((..(((.((((.(((..(((((((((((((..((((((.((....))....((.(((((((......)))))))..))))))))))
)))).....)))))))...))).)))).))).))))..........
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|A7TEY0|ATG7_VANPO: 0.0000000000007 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
