ABOUT THIS RECORDspecies: Schistosoma japonicum
miRNA family: mir-465
source: miRNEST
Taxonomy by NCBI:
Schistosoma japonicum Schistosoma Schistosomatidae Schistosomatoidea Strigeidida Digenea Trematoda Platyhelminthes Acoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TATTTAGAATGGTACTGTTGT miRNA* AACAGTTTCATCTTCGATATA mismatches: 5 bulges: 0 |
pre-miRNA
GAGAGTATAAAATTGTAAAAAACAAAAGATAAAACAGTTTCATCTTCGATATATAAGCATTATTTAGAATGGTACTGTTGTTGCGGTCACCAGCTGTCAG
TAAATCATTT
dot-bracket secondary structure
............((((.....)))).......((((((.((((.((.((((.........)))).)).)))).))))))...(((((.....)))))...
..........
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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GAGAGTATAAAATTGTAAAAAACAAAAGATAAAACAGTTTCATCTTCGATATATAAGCATTATTTAGAATGGTACTGTTGTTGCGGTCACCAGCTGTCAG
TAAATCATTT
dot-bracket secondary structure
............((((.....)))).......((((((.((((.((.((((.........)))).)).)))).))))))...(((((.....)))))...
..........
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
