ABOUT THIS RECORDspecies: Helobdella robusta
miRNA family: mir-467
source: miRNEST
Taxonomy by NCBI:
Helobdella robusta Helobdella Glossiphoniidae Rhynchobdellida Hirudinea Hirudinida Clitellata Annelida Annelida/Echiura/Pogonophora group Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TACATACACACATACATACAT miRNA* TTATGTATGTATGTATGTATG mismatches: 2 bulges: 0 |
pre-miRNA
ACACACTTACATACATACACACATACATACATACACATACTCATGTAATGATAGATGGAAGGTTGTGCGGATCTAAAAAAAAAAAGAAGATCGACGAGAT
GGTTCAACGAACGGTGGTAGATTTATGTATGTATGTATGTATGATGATGAT
dot-bracket secondary structure
.........((((((((((.(((((((((.((.(((...(((.((((.((((.........))))))))(((((.............)))))...)))..
.((((...)))).)))....)).))))))))).))))))))))........
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ACACACTTACATACATACACACATACATACATACACATACTCATGTAATGATAGATGGAAGGTTGTGCGGATCTAAAAAAAAAAAGAAGATCGACGAGAT
GGTTCAACGAACGGTGGTAGATTTATGTATGTATGTATGTATGATGATGAT
dot-bracket secondary structure
.........((((((((((.(((((((((.((.(((...(((.((((.((((.........))))))))(((((.............)))))...)))..
.((((...)))).)))....)).))))))))).))))))))))........
SIMILARITIES| miRBase mmu-mir-297a-1: 0.0005 PMRD no hits microPC no hits | UniProt no hits RFAM U4: 0.0005 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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