ABOUT THIS RECORDspecies: Helobdella robusta
miRNA family: mir-155
source: miRNEST
Taxonomy by NCBI:
Helobdella robusta Helobdella Glossiphoniidae Rhynchobdellida Hirudinea Hirudinida Clitellata Annelida Annelida/Echiura/Pogonophora group Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTAATGATAATAGTGATAAGA miRNA* ATTATCATTATTATCATTACTA mismatches: 1 bulges: 1 |
pre-miRNA
AATAACACAAATTAATGATAATAGTGATAAGATACAAAGAACAACGAGTCCCAAGTGGTTGAAAGAACAAGATGGAAACAATAAAATCCATAAAATCTAA
ATAATAATTATTATCATACTATCACTATTAGGTTCACCATCATCATCATTACTATCATCATTATCATTATTATCATTACTATCACTATC
dot-bracket secondary structure
............(((((((((((((((((((((.....((((....(((.....((((((((.(((.....(((((..........)))))....))).(
((((...))))).))).))))).))).....)))).....................))).))))))))))))))))))...........
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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AATAACACAAATTAATGATAATAGTGATAAGATACAAAGAACAACGAGTCCCAAGTGGTTGAAAGAACAAGATGGAAACAATAAAATCCATAAAATCTAA
ATAATAATTATTATCATACTATCACTATTAGGTTCACCATCATCATCATTACTATCATCATTATCATTATTATCATTACTATCACTATC
dot-bracket secondary structure
............(((((((((((((((((((((.....((((....(((.....((((((((.(((.....(((((..........)))))....))).(
((((...))))).))).))))).))).....)))).....................))).))))))))))))))))))...........
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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