ABOUT THIS RECORDspecies: Petrolisthes cinctipes
miRNA family: mir-1297
source: miRNEST
Taxonomy by NCBI:
Petrolisthes cinctipes Petrolisthes Porcellanidae Galatheoidea Anomura Pleocyemata Decapoda Eucarida Eumalacostraca Malacostraca Crustacea Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTCAGGTAATTCAGGTACTTC miRNA* GGTAATTGAGTCCTTAATA mismatches: 2 bulges: 2 |
pre-miRNA
GCAATAATATGAGGTAATTGAGTCCTTAATAATCGTACTGGGAGTCACCAGCTATGGCTGAATTGAATCTGTGATTTCTGGTACATGTATTCAGGTAATT
CAGGTACTTCATTTACTAT
dot-bracket secondary structure
........((((((((.(((((((((.((((...((((((((((((((((((....))))..........))))))))))))))...)))).)))..)))
))).)))))))).......
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GCAATAATATGAGGTAATTGAGTCCTTAATAATCGTACTGGGAGTCACCAGCTATGGCTGAATTGAATCTGTGATTTCTGGTACATGTATTCAGGTAATT
CAGGTACTTCATTTACTAT
dot-bracket secondary structure
........((((((((.(((((((((.((((...((((((((((((((((((....))))..........))))))))))))))...)))).)))..)))
))).)))))))).......
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
