ABOUT THIS RECORDspecies: Taeniopygia guttata
miRNA family: mir-181
source: miRNEST
Taxonomy by NCBI:
Taeniopygia guttata Taeniopygia Estrildinae Estrildidae Passeroidea Passeriformes Neognathae Aves Coelurosauria Theropoda Saurischia Dinosauria Archosauria Sauria Sauropsida Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AACATTCAACGCTGTCGGTGA miRNA* ATCGACCGTTGATTGTACC mismatches: 3 bulges: 2 |
pre-miRNA
TTGCTTCAGTGAACATTCAACGCTGTCGGTGAGTTTGGAATTAAAGTGAAAACCATCGACCGTTGATTGTACCCTCCAGCT
dot-bracket secondary structure
..(((..((...(((.((((((..(((((((.((((.............))))))))))))))))).)))...))..))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TTGCTTCAGTGAACATTCAACGCTGTCGGTGAGTTTGGAATTAAAGTGAAAACCATCGACCGTTGATTGTACCCTCCAGCT
dot-bracket secondary structure
..(((..((...(((.((((((..(((((((.((((.............))))))))))))))))).)))...))..))).
SIMILARITIES| miRBase gga-mir-181a-1: 2e-38 PMRD no hits microPC no hits | UniProt no hits RFAM mir-181: 2e-36 | most similar mature miRNAs |
Identical with: tgu-mir-181a-1 from miRBase (MNEST026483) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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