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ABOUT THIS RECORD
ID:
MNEST008891
species:
Aphis gossypii
miRNA family:
mir-3556
source:
miRNEST
Taxonomy by NCBI:
Aphis gossypii
Aphis
Aphis
Aphidini
Aphidinae
Aphididae
Aphidoidea
Aphidomorpha
Aphidiformes
Sternorrhyncha
Hemiptera
Paraneoptera
Neoptera
Pterygota
Dicondylia
Insecta
Hexapoda
Pancrustacea
Mandibulata
Arthropoda
Panarthropoda
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ACTGGTTTCAAATGGTGCTAG
miRNA*
ATGCACCACTACGAAACCAGTAT
mismatches:
3
bulges:
2
View larger
pre-miRNA
CATCAATAAGT
ACTGGTTTCAAATGGTGCTAG
ACTAGTTCAAAAATTACTTCT
ATGCACCACTACGAAACCAGTAT
TCACTGAC
dot-bracket secondary structure
..(((...(((
(((((((((...(((((((((
(..(((.........))))))
).))))))....)))))))))))
)...))).
SIMILARITIES
miRBase
api-mir-29
:
0.000000000001
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-29: 3e-16
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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