ABOUT THIS RECORDspecies: Phaseolus vulgaris
miRNA family: MIR167
source: miRNEST
Taxonomy by NCBI:
Phaseolus vulgaris Phaseolus Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGAAGCTGCCAGCATGATCTG miRNA* GATCATGTGGCTGCTTCACC mismatches: 1 bulges: 1 |
pre-miRNA
GTATACCCTCTTATCGTGCACCTGCAGCAGTTGAAGCTGCCAGCATGATCTGAGTTTACCTTCTATAATGGTAAAAACAGATCATGTGGCTGCTTCACCT
GTTGAATGGAAGCATACACAAACCCTA
dot-bracket secondary structure
...............((((.((..((((((.((((((.((((.(((((((((..((((((.........))))))..))))))))))))).)))))).))
))))...))..))))............
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GTATACCCTCTTATCGTGCACCTGCAGCAGTTGAAGCTGCCAGCATGATCTGAGTTTACCTTCTATAATGGTAAAAACAGATCATGTGGCTGCTTCACCT
GTTGAATGGAAGCATACACAAACCCTA
dot-bracket secondary structure
...............((((.((..((((((.((((((.((((.(((((((((..((((((.........))))))..))))))))))))).)))))).))
))))...))..))))............
SIMILARITIES| miRBase gso-MIR167a: 3e-32 PMRD lja-miR167: 5e-31 microPC miR167: 1e-31 | UniProt no hits RFAM MIR167_1: 0.00000003 | most similar mature miRNAs |
Identical with: miR167 from microPC (MNEST045987) |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
