ABOUT THIS RECORDspecies: Phaseolus vulgaris
miRNA family: MIR167
source: miRNEST
Taxonomy by NCBI:
Phaseolus vulgaris Phaseolus Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGAAGCTGCCAGCATGATCTA miRNA* GGTCATGCTGTGACAGCCTCACT mismatches: 2 bulges: 2 |
pre-miRNA
CAGAAGTTCGCAAAGGAAAAAGTGAAGCTGCCAGCATGATCTAGCTTTGGTTAGAGAGAGCAGAAGAGTGCTAACCCTGACTAGGTCATGCTGTGACAGCC
TCACTCCTTCCTGTTTGGGGACC
dot-bracket secondary structure
)....((((.((((((((..(((((.((((.(((((((((((((.((.((((((.....((......)).))))))..)))))))))))))))...)))).
)))))..)))))..))).)))).
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CAGAAGTTCGCAAAGGAAAAAGTGAAGCTGCCAGCATGATCTAGCTTTGGTTAGAGAGAGCAGAAGAGTGCTAACCCTGACTAGGTCATGCTGTGACAGCC
TCACTCCTTCCTGTTTGGGGACC
dot-bracket secondary structure
)....((((.((((((((..(((((.((((.(((((((((((((.((.((((((.....((......)).))))))..)))))))))))))))...)))).
)))))..)))))..))).)))).
SIMILARITIES| miRBase gma-MIR167a: 3.0E-48 PMRD gma-miR167a: 3.0E-48 microPC miR167: 4.0E-41 | UniProt no hits RFAM 1MIR167_1: 3.0E-23 | most similar mature miRNAs |
Identical with: miR167 from microPC (MNEST046832) |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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