miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
ABOUT THIS RECORD
ID:
MNEST008937
species:
Ipomoea nil
miRNA family:
MIR2673
source:
miRNEST
Taxonomy by NCBI:
Ipomoea nil
Ipomoea
Ipomoeeae
Convolvulaceae
Solanales
lamiids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CATCTTCCTCTTCCTCTTCTT
miRNA*
GAGGCGGAAGGAGGGGCGGTGGT
mismatches:
2
bulges:
2
View larger
pre-miRNA
TTGTGCTTGTT
CATCTTCCTCTTCCTCTTCTT
CTTCACACTGTCGGCCCACATTTTGGGAGATTCTGGGGACGTAACGCCAGCATCCTCGGACGGAATGA
TGAACCCAGGCTGAGAAATTGGGTTTAAGAAATACTCAAAAGAAAAGGTTGGGTAGAACCGCGAGCAAGCGTTCGGATTTGAATCTTCTCTTTTGGGTTC
NAGAAAGATCGGGTGTTGGACTAGTCTACCGTCGAAGA
GAGGCGGAAGGAGGGGCGGTGGT
GGTGGCGG
dot-bracket secondary structure
...((((...(
((((((((((((((.(((((.
((((.....(((..((((.....)))).)))..(((((((......((((((((((((.......)))
(((((((((.........))))))))).((...((((((((((.((((((.((..((((.((......))))))....)).)))))).))))))))))..
........)))))))))))....)))).)))..)))))
)))).)))).)))))).))))).
...)))).
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
Source sequences
download this record