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ABOUT THIS RECORD
ID:
MNEST008938
species:
Ipomoea nil
miRNA family:
MIR2673
source:
miRNEST
Taxonomy by NCBI:
Ipomoea nil
Ipomoea
Ipomoeeae
Convolvulaceae
Solanales
lamiids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CCTCTTCCTCTTCTTCTTCAC
miRNA*
GAAGAGAGGCGGAAGGAGGGG
mismatches:
3
bulges:
2
View larger
pre-miRNA
CAGTTTGTGCTTGTTCATCTT
CCTCTTCCTCTTCTTCTTCAC
ACTGTCGGCCCACATTTTGGGAGATTCTGGGGACGTAACGCCAGCATCCTCGGACGGA
ATGATGAACCCAGGCTGAGAAATTGGGTTTAAGAAATACTCAAAAGAAAAGGTTGGGTAGAACCGCGAGCAAGCGTTCGGATTTGAATCTTCTCTTTTGG
GTTCNAGAAAGATCGGGTGTTGGACTAGTCTACCGTC
GAAGAGAGGCGGAAGGAGGGG
CGGTGGTGGTGGCGGAGT
dot-bracket secondary structure
.......((((...(((((((
((((((((.(((((.((((..
...(((..((((.....)))).)))..(((((((......((((((((((((......
.)))(((((((((.........))))))))).((...((((((((((.((((((.((..((((.((......))))))....)).)))))).))))))))
))..........)))))))))))....)))).)))..
))))))))).)))).))))))
.)))))....))))....
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
Source sequences
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