ABOUT THIS RECORDspecies: Ipomoea nil
miRNA family: MIR414
source: miRNEST
Taxonomy by NCBI:
Ipomoea nil Ipomoea Ipomoeeae Convolvulaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CCCTCATCATCATCATCTTCA miRNA* AGGACGGTGAAGATTGGAGGAGT mismatches: 4 bulges: 2 |
pre-miRNA
CAAAACCCTCATCATCATCATCTTCATCTTCATCTTCATCGTCGATTGCGTTTGGAGGCGGGGAGAGAAATTCAAGATCGATTCGGATGTAGAAGAAGTG
ATGATCAGATGTGGAGGAGGACGGTGAAGATTGGAGGAGT
dot-bracket secondary structure
......(((((((.(((((.(((((.(((.((((((((((.((..(((((((((((..(((.(((.....)))....))).)))))))))))..))...)
))))..))))).))).))))).))))).)))..))))...
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CAAAACCCTCATCATCATCATCTTCATCTTCATCTTCATCGTCGATTGCGTTTGGAGGCGGGGAGAGAAATTCAAGATCGATTCGGATGTAGAAGAAGTG
ATGATCAGATGTGGAGGAGGACGGTGAAGATTGGAGGAGT
dot-bracket secondary structure
......(((((((.(((((.(((((.(((.((((((((((.((..(((((((((((..(((.(((.....)))....))).)))))))))))..))...)
))))..))))).))).))))).))))).)))..))))...
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
