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ABOUT THIS RECORD
ID:
MNEST008953
species:
Ipomoea nil
miRNA family:
MIR172
source:
miRNEST
Taxonomy by NCBI:
Ipomoea nil
Ipomoea
Ipomoeeae
Convolvulaceae
Solanales
lamiids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GGAATCTTGATGATGATTCCT
miRNA*
GAATCATCATAAAGATTCCAT
mismatches:
1
bulges:
0
View larger
pre-miRNA
ACATAATATCAG
GAATCATCATAAAGATTCCAT
TCTTAACCAGCAAGTGATTTTGTTAGAATAGAATTTACATGGGATAGTTAAGTTCTATCCTAACAAA
GTCACTTATTGTTTAAGAAT
GGAATCTTGATGATGATTCCT
AATAAGAGA
dot-bracket secondary structure
......(((.((
((((((((((.((((((((((
((((((.(((.(((((((((((((((.((((((((((...........)))))))))).))))))))
))))))).))).))))))))
)))))))).))))))))))))
.))).....
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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